The CPTtools package collects tools the originally appeared in a number
of different publications, listed below:

  Russell G. Almond (20XX), CPTtools: Tools for Creating Conditional
  Probability Tables, https://pluto.coe.fsu.edu/CPTtools

A BibTeX entry for LaTeX users is

  @Manual{,
    title = {CPTtools:  Tools for Creating Conditional Probability Tables},
    author = {Russell G. Almond},
    year = {?},
    journal = {?},
    volume = {?},
    number = {?},
    pages = {?},
    sponsors = {Bill & Melinda Gates Foundation grant
"Games as Learning/Assessment:  Stealth Assessment" (#0PP1035331,
Val Shute, PI) National Science foundation grant "DIP:
Game-based Assessment and Support of STEM-related Competencies"
(#1628937, Val Shute, PI) The NSF project "Mathematical Learning via
Architectual Design and Modeling Using E-Rebuild." (#1720533,
Fengfeng Ke, PI)},
  }

  Almond, Mislevy, Steinberg, Yan & Williamson (2015). _Bayeisan
  Networks in Educational Assessment._ Springer.

A BibTeX entry for LaTeX users is

  @Book{,
    title = {{Bayesian} Networks in Educational Assessment},
    author = {Russell G. Almond and Robert J. Mislevy and Linda S. Steinberg and Duanli Yan and David M. Williamson},
    publisher = {Springer},
    year = {2015},
    isbn = {978-1-4939-2124-9},
  }

  Almond (2015).  An IRT-based Parameterization for Conditional
  Probability Tables.  Paper presented in the Bayesian Modelling
  Application Workshop at the Uncertainty in Artificial Intelligence
  (UAI) Conference, Amsterdam, The Netherlands.

A BibTeX entry for LaTeX users is

  @InProceedings{,
    title = {An IRT-based Parameterization for Conditional Probability Tables},
    author = {Russell G. Almond},
    booktitle = {Bayesian Modelling Application Workshop at the Uncertainty in Artificial Intelligence ({UAI}) Conference},
    year = {2015},
    address = {Amsterdam, The Netherlands},
    editor = {J. M. Agosta and R. N. Carvalho},
    month = {July},
    note = {Additional material available at http://pluto.coe.fsu.edu/RNetica/},
  }

  Almond (2010).  'I can name that Bayesian Network in Two Matrixes.
  _International Journal of Approximate Reasoning_, 51, 167--178.

A BibTeX entry for LaTeX users is

  @Article{,
    title = {`{I} can name that {Bayesian} Network in Two Matrixes'},
    author = {Russell G. Almond},
    journal = {International Journal of Approximate Reasoning},
    year = {2010},
    pages = {167--178},
    volume = {51},
    doi = {10.1016/j.ijar.2009.04.005},
    url = {http://dx.doi.org/10.1016/j.ijar.2009.04.005},
  }

  Almond, DiBellow, Jenkins, Mislevy, Senturk, Steinberg & Yan (2001).
  Models for Conditional Probability Tables in Educational Assessment.
  In Jaakkola and Richardson (eds).  _Artificial Intelligence and
  Statistics 2001_, 237--143.  Morgan Kaufmann.

A BibTeX entry for LaTeX users is

  @InProceedings{,
    title = {Models for Conditional Probability Tables in Educational Assessment},
    author = {Russell G. Almond and Louis DiBello and Frank Jenkins and Robert J. Mislevy and Denise Senturk and Linda S. Steinberg and Duanli Yan},
    booktitle = {Artificial {I}ntelligence and {S}tatistics 2001},
    year = {2001},
    editor = {T. Jaakkola and T. Richardson},
    pages = {137-143},
    publisher = {Morgan Kaufmann},
  }

  Almond, Shute, Underwood and Zapata-Rivera (2009).  Bayesian
  Networks: A Teacher's Veiw.  _International Journal of Approximate
  Reasoning,_ 50, 450--460.

A BibTeX entry for LaTeX users is

  @Article{,
    title = {{Bayesian} Networks: A Teacher's View},
    author = {Russell G. Almond and Valerie J. Shute and Jody S. Underwood and Juan-Diego Zapata-Rivera},
    journal = {International Journal of Approximate Reasoning},
    year = {2009},
    pages = {450--460},
    volume = {50},
    doi = {10.1016/j.ijar.2008.04.011},
  }

  Madigan, Mosurski & Almond (1997).  Graphical explanation in belief
  networks.  _Journal of Computational Graphics and Statistics,_ 6(2),
  160-181.

A BibTeX entry for LaTeX users is

  @Article{,
    title = {Graphical explanation in belief networks},
    author = {David Madigan and K. Mosurski and Russell G. Almond},
    journal = {Journal of Computational Graphics and Statistics},
    year = {1997},
    number = {2},
    pages = {160-181},
    volume = {6},
    url = {http://www.amstat.org/publications/jcgs/index.cfm?fuseaction=madiganjun},
  }

  Shute, Hansen & Almond (2008).  You Can't Fatten A Hog by Weighing It
  - Or Can You? Evaluating an Assessment for Learning System Called
  ACED.  _International Journal of Artificial Intelligence in
  Education,_ 18(4), 289--316.

A BibTeX entry for LaTeX users is

  @Article{,
    title = {You Can't Fatten A Hog by Weighing It - Or Can You? {E}valuating an Assessment for Learning System Called {ACED}},
    author = {Valerie J. Shute and Eric G. Hansen and Russell G. Almond},
    journal = {International Journal of Artificial Intelligence in Education},
    year = {2008},
    number = {4},
    pages = {289--316},
    volume = {18},
    url = {http://www.ijaied.org/iaied/ijaied/abstract/Vol_18/Shute08.html},
  }

  Sinharay & Almond (2007).  Assessing Fit of Cognitively Diagnostic
  Models---A Case Study.  _Educational and Psychological Measurement,_
  67(2), 239--257.

A BibTeX entry for LaTeX users is

  @Article{,
    title = {Assessing Fit of Cognitively Diagnostic Models---A Case Study},
    author = {Sandip Sinharay and Russell G. Almond},
    journal = {Educational and Psychological Measurement},
    year = {2007},
    number = {2},
    pages = {239--257},
    volume = {67},
  }

  Almond (2016).  Tips and Tricks for Building {Bayesian} Networks for
  Scoring Game-Based Assessments.  In Suzuki & Ueno (eds), _Lecture
  Notes in Computer Science 9505, AMBN 2015,_ Springer.  250--263.

A BibTeX entry for LaTeX users is

  @InCollection{,
    title = {Tips and Tricks for Building {Bayesian} Networks for Scoring Game-Based Assessments},
    author = {Russell G. Almond},
    booktitle = {Lecture Notes in Computer Science 9505, {AMBN} 2015},
    publisher = {Springer},
    year = {2016},
    editor = {Jo Suzuki and Mameo Ueno},
    pages = {250--263},
  }

Work on RNetica, CPTtools and Peanut has been sponsored in part by the
_Physics Playground_ and _E-Rebuild_ projects, on which many of the
tools were tested.  _Physics Playground_ development was supported by
the Bill & Melinda Gates Foundation grant "Games as
Learning/Assessment: Stealth Assessment" (#0PP1035331, Val Shute, PI)
and the National Science Foundation grant "DIP: Game-based Assessment
and Support of STEM-related Competencies" (#1628937, Val Shute, PI).
The project "Mathematical Learning via Architectual Design and Modeling
Using E-Rebuild." (#1720533, Fengfeng Ke, PI) has provided additional
support.